Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.23□□□□□ -0.29
Smarcd3Q6P9Z1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd3Q6P9Z1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcd3Q6P9Z1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcd3Q6P9Z1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms