Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm5566-201ENSMUST00000116118 459 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm8410-201ENSMUST00000117225 605 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm14042-201ENSMUST00000120139 833 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm28630-201ENSMUST00000187806 498 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Gm9519-201ENSMUST00000206108 1337 ntBASIC15.15■□□□□ 0.02
Scube3Q66PY1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.14■□□□□ 0.01
Scube3Q66PY1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.14■□□□□ 0.01
Scube3Q66PY1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.14■□□□□ 0.01
Scube3Q66PY1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube3Q66PY1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 AC154849.3-201ENSMUST00000223733 1660 ntBASIC15.13■□□□□ 0.01
Scube3Q66PY1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.13■□□□□ 0.01
Scube3Q66PY1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Gm27622-201ENSMUST00000183779 60 ntBASIC15.13■□□□□ 0.01
Scube3Q66PY1 Gm38294-201ENSMUST00000192831 381 ntBASIC15.13■□□□□ 0.01
Scube3Q66PY1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.13■□□□□ 0.01
Scube3Q66PY1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
Scube3Q66PY1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Gm23547-201ENSMUST00000158210 271 ntBASIC15.12■□□□□ 0.01
Scube3Q66PY1 Gm9719-201ENSMUST00000162765 543 ntBASIC15.12■□□□□ 0.01
Scube3Q66PY1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms