Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.2■□□□□ 0.5
Clcn1Q64347 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Clcn1Q64347 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 BC001981-202ENSMUST00000191393 1545 ntBASIC18.19■□□□□ 0.5
Clcn1Q64347 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.19■□□□□ 0.5
Clcn1Q64347 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.19■□□□□ 0.5
Clcn1Q64347 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.19■□□□□ 0.5
Clcn1Q64347 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.19■□□□□ 0.5
Clcn1Q64347 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.19■□□□□ 0.5
Clcn1Q64347 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clcn1Q64347 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn1Q64347 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Gm11918-201ENSMUST00000121660 179 ntBASIC18.18■□□□□ 0.5
Clcn1Q64347 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn1Q64347 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn1Q64347 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.18■□□□□ 0.5
Clcn1Q64347 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn1Q64347 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Gm13829-201ENSMUST00000119600 138 ntBASIC18.17■□□□□ 0.5
Clcn1Q64347 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.17■□□□□ 0.5
Clcn1Q64347 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Gm9182-201ENSMUST00000217829 639 ntBASIC18.17■□□□□ 0.5
Clcn1Q64347 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.17■□□□□ 0.5
Clcn1Q64347 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clcn1Q64347 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clcn1Q64347 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.17■□□□□ 0.5
Clcn1Q64347 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn1Q64347 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.16■□□□□ 0.5
Clcn1Q64347 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Clcn1Q64347 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn1Q64347 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms