Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.65■□□□□ 0.26
Scn9aQ62205 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn9aQ62205 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn9aQ62205 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.65■□□□□ 0.26
Scn9aQ62205 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
Scn9aQ62205 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.65■□□□□ 0.26
Scn9aQ62205 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn9aQ62205 Gm29199-201ENSMUST00000187766 775 ntBASIC16.65■□□□□ 0.26
Scn9aQ62205 Gm37259-201ENSMUST00000193903 849 ntBASIC16.65■□□□□ 0.26
Scn9aQ62205 Gm44397-201ENSMUST00000195950 113 ntBASIC16.65■□□□□ 0.26
Scn9aQ62205 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn9aQ62205 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Scn9aQ62205 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn9aQ62205 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Scn9aQ62205 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm26083-201ENSMUST00000157904 193 ntBASIC16.64■□□□□ 0.25
Scn9aQ62205 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.64■□□□□ 0.25
Scn9aQ62205 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm38341-201ENSMUST00000195357 515 ntBASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.64■□□□□ 0.25
Scn9aQ62205 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scn9aQ62205 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.64■□□□□ 0.25
Scn9aQ62205 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn9aQ62205 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scn9aQ62205 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.63■□□□□ 0.25
Scn9aQ62205 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.63■□□□□ 0.25
Scn9aQ62205 Gm29705-201ENSMUST00000212598 474 ntBASIC16.63■□□□□ 0.25
Scn9aQ62205 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.63■□□□□ 0.25
Scn9aQ62205 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.63■□□□□ 0.25
Scn9aQ62205 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn9aQ62205 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scn9aQ62205 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn9aQ62205 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm4271-201ENSMUST00000174444 973 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm27682-201ENSMUST00000183930 110 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm38266-201ENSMUST00000194931 421 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Scn9aQ62205 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm8213-201ENSMUST00000118191 441 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm12203-201ENSMUST00000118235 598 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm12209-201ENSMUST00000120089 596 ntBASIC16.62■□□□□ 0.25
Scn9aQ62205 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms