Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.68■□□□□ 0.42
Trim27Q62158 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim27Q62158 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Trim27Q62158 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.68■□□□□ 0.42
Trim27Q62158 Gm12882-201ENSMUST00000121696 517 ntBASIC17.68■□□□□ 0.42
Trim27Q62158 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Gm18766-201ENSMUST00000189811 808 ntBASIC17.68■□□□□ 0.42
Trim27Q62158 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim27Q62158 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim27Q62158 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim27Q62158 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim27Q62158 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.67■□□□□ 0.42
Trim27Q62158 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.67■□□□□ 0.42
Trim27Q62158 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim27Q62158 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim27Q62158 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Trim27Q62158 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim27Q62158 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim27Q62158 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim27Q62158 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim27Q62158 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim27Q62158 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim27Q62158 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim27Q62158 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim27Q62158 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Gm9824-201ENSMUST00000178707 561 ntBASIC17.66■□□□□ 0.42
Trim27Q62158 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim27Q62158 Gm37935-201ENSMUST00000192012 982 ntBASIC17.66■□□□□ 0.42
Trim27Q62158 Gm43575-201ENSMUST00000196420 516 ntBASIC17.66■□□□□ 0.42
Trim27Q62158 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim27Q62158 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim27Q62158 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.66■□□□□ 0.42
Trim27Q62158 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim27Q62158 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.66■□□□□ 0.42
Trim27Q62158 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim27Q62158 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim27Q62158 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.65■□□□□ 0.42
Trim27Q62158 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim27Q62158 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim27Q62158 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim27Q62158 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.65■□□□□ 0.42
Trim27Q62158 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.65■□□□□ 0.42
Trim27Q62158 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trim27Q62158 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms