Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox17Q61473 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox17Q61473 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.51□□□□□ -0.25
Sox17Q61473 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox17Q61473 Gm8749-201ENSMUST00000117737 331 ntBASIC13.51□□□□□ -0.25
Sox17Q61473 Gm13418-201ENSMUST00000119097 944 ntBASIC13.51□□□□□ -0.25
Sox17Q61473 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.51□□□□□ -0.25
Sox17Q61473 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox17Q61473 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.51□□□□□ -0.25
Sox17Q61473 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox17Q61473 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Sox17Q61473 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Gm4535-201ENSMUST00000182274 558 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Gm27357-201ENSMUST00000183754 135 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Gm37153-201ENSMUST00000193637 231 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Gm10355-201ENSMUST00000097146 517 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sox17Q61473 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.5□□□□□ -0.25
Sox17Q61473 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Sox17Q61473 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Sox17Q61473 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Sox17Q61473 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox17Q61473 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.5□□□□□ -0.25
Sox17Q61473 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox17Q61473 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox17Q61473 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.49□□□□□ -0.25
Sox17Q61473 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox17Q61473 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Gm13464-201ENSMUST00000119418 935 ntBASIC13.49□□□□□ -0.25
Sox17Q61473 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Sox17Q61473 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox17Q61473 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox17Q61473 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sox17Q61473 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms