Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm6973-201ENSMUST00000117080 721 ntBASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm44335-201ENSMUST00000196879 141 ntBASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm44297-201ENSMUST00000198304 141 ntBASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm44346-201ENSMUST00000198851 141 ntBASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx2Q61412 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vsx2Q61412 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Vsx2Q61412 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Vsx2Q61412 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Gm15483-201ENSMUST00000120338 456 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Gm18889-201ENSMUST00000174284 929 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Gm18057-201ENSMUST00000208220 503 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Vsx2Q61412 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Vsx2Q61412 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.05□□□□□ -0.16
Vsx2Q61412 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx2Q61412 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.04□□□□□ -0.16
Vsx2Q61412 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.04□□□□□ -0.16
Vsx2Q61412 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx2Q61412 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vsx2Q61412 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms