Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six4Q61321 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.52□□□□□ -0.08
Six4Q61321 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Six4Q61321 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six4Q61321 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six4Q61321 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Six4Q61321 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.52□□□□□ -0.08
Six4Q61321 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six4Q61321 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Six4Q61321 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.52□□□□□ -0.08
Six4Q61321 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Six4Q61321 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Six4Q61321 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Six4Q61321 Gm22175-201ENSMUST00000175007 78 ntBASIC14.52□□□□□ -0.09
Six4Q61321 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Six4Q61321 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.52□□□□□ -0.09
Six4Q61321 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.52□□□□□ -0.09
Six4Q61321 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.52□□□□□ -0.09
Six4Q61321 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Six4Q61321 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.52□□□□□ -0.09
Six4Q61321 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Six4Q61321 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six4Q61321 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.52□□□□□ -0.09
Six4Q61321 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.51□□□□□ -0.09
Six4Q61321 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 Gm45453-201ENSMUST00000211758 853 ntBASIC14.51□□□□□ -0.09
Six4Q61321 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.51□□□□□ -0.09
Six4Q61321 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.51□□□□□ -0.09
Six4Q61321 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Six4Q61321 BC001981-202ENSMUST00000191393 1545 ntBASIC14.51□□□□□ -0.09
Six4Q61321 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six4Q61321 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Six4Q61321 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Six4Q61321 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Six4Q61321 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Six4Q61321 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.5□□□□□ -0.09
Six4Q61321 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Six4Q61321 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.5□□□□□ -0.09
Six4Q61321 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Six4Q61321 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.5□□□□□ -0.09
Six4Q61321 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.49□□□□□ -0.09
Six4Q61321 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Six4Q61321 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Gm8410-201ENSMUST00000117225 605 ntBASIC14.49□□□□□ -0.09
Six4Q61321 Gm12428-201ENSMUST00000119844 727 ntBASIC14.49□□□□□ -0.09
Six4Q61321 Gm12882-201ENSMUST00000121696 517 ntBASIC14.49□□□□□ -0.09
Six4Q61321 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Gm27618-201ENSMUST00000183671 60 ntBASIC14.49□□□□□ -0.09
Six4Q61321 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms