Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.81■□□□□ 0.12
Col11a1Q61245 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.81■□□□□ 0.12
Col11a1Q61245 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a1Q61245 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col11a1Q61245 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.8■□□□□ 0.12
Col11a1Q61245 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.8■□□□□ 0.12
Col11a1Q61245 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.8■□□□□ 0.12
Col11a1Q61245 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Gm42627-201ENSMUST00000197347 224 ntBASIC15.8■□□□□ 0.12
Col11a1Q61245 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.8■□□□□ 0.12
Col11a1Q61245 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.8■□□□□ 0.12
Col11a1Q61245 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.8■□□□□ 0.12
Col11a1Q61245 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col11a1Q61245 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a1Q61245 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Gm13786-201ENSMUST00000122371 333 ntBASIC15.79■□□□□ 0.12
Col11a1Q61245 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.79■□□□□ 0.12
Col11a1Q61245 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.79■□□□□ 0.12
Col11a1Q61245 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.79■□□□□ 0.12
Col11a1Q61245 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.79■□□□□ 0.12
Col11a1Q61245 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col11a1Q61245 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col11a1Q61245 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col11a1Q61245 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a1Q61245 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.78■□□□□ 0.12
Col11a1Q61245 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.78■□□□□ 0.12
Col11a1Q61245 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.78■□□□□ 0.12
Col11a1Q61245 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.78■□□□□ 0.12
Col11a1Q61245 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms