Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps54Q5SPW0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps54Q5SPW0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps54Q5SPW0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps54Q5SPW0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps54Q5SPW0 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gm14767-201ENSMUST00000121559 586 ntBASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gm27989-201ENSMUST00000184721 107 ntBASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gm7775-201ENSMUST00000218871 853 ntBASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps54Q5SPW0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.25■□□□□ 0.35
Vps54Q5SPW0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Gm46209-201ENSMUST00000217912 553 ntBASIC17.25■□□□□ 0.35
Vps54Q5SPW0 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps54Q5SPW0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 AA619741-201ENSMUST00000195095 646 ntBASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps54Q5SPW0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Gm12882-201ENSMUST00000121696 517 ntBASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Gm27321-201ENSMUST00000185021 205 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms