Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.82□□□□□ -0.68
Trav3-3Q5R1C3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3-3Q5R1C3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms