Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Mir3113-201ENSMUST00000175478 76 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm2272-201ENSMUST00000194903 582 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Gm17271-201ENSMUST00000165535 355 ntBASIC14.24□□□□□ -0.13
Scn2bQ56A07 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.24□□□□□ -0.13
Scn2bQ56A07 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.24□□□□□ -0.13
Scn2bQ56A07 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn2bQ56A07 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn2bQ56A07 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Gm16198-201ENSMUST00000118766 670 ntBASIC14.23□□□□□ -0.13
Scn2bQ56A07 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.23□□□□□ -0.13
Scn2bQ56A07 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scn2bQ56A07 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Gm16026-204ENSMUST00000162652 683 ntBASIC14.22□□□□□ -0.13
Scn2bQ56A07 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.22□□□□□ -0.13
Scn2bQ56A07 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.22□□□□□ -0.13
Scn2bQ56A07 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn2bQ56A07 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms