Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syne3Q4FZC9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.28■□□□□ 0.04
Syne3Q4FZC9 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syne3Q4FZC9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Gm20553-201ENSMUST00000204205 844 ntBASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.27■□□□□ 0.04
Syne3Q4FZC9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Syne3Q4FZC9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Syne3Q4FZC9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Syne3Q4FZC9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Syne3Q4FZC9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Syne3Q4FZC9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.27■□□□□ 0.03
Syne3Q4FZC9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Syne3Q4FZC9 Gm18737-201ENSMUST00000173594 937 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms