Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Gm3436-201ENSMUST00000179930 840 ntBASIC17.15■□□□□ 0.34
SfswapQ3USH5 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.15■□□□□ 0.34
SfswapQ3USH5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Gm9229-201ENSMUST00000222777 126 ntBASIC17.15■□□□□ 0.34
SfswapQ3USH5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.15■□□□□ 0.34
SfswapQ3USH5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.15■□□□□ 0.34
SfswapQ3USH5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SfswapQ3USH5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
SfswapQ3USH5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SfswapQ3USH5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SfswapQ3USH5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SfswapQ3USH5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SfswapQ3USH5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Gm10275-202ENSMUST00000168697 495 ntBASIC17.14■□□□□ 0.33
SfswapQ3USH5 Gm5745-201ENSMUST00000183748 313 ntBASIC17.14■□□□□ 0.33
SfswapQ3USH5 AA619741-201ENSMUST00000195095 646 ntBASIC17.14■□□□□ 0.33
SfswapQ3USH5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Gm6916-202ENSMUST00000205523 195 ntBASIC17.14■□□□□ 0.33
SfswapQ3USH5 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.14■□□□□ 0.33
SfswapQ3USH5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Gm10275-201ENSMUST00000092620 635 ntBASIC17.14■□□□□ 0.33
SfswapQ3USH5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SfswapQ3USH5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 BC001981-202ENSMUST00000191393 1545 ntBASIC17.13■□□□□ 0.33
SfswapQ3USH5 Gm11424-201ENSMUST00000121929 829 ntBASIC17.13■□□□□ 0.33
SfswapQ3USH5 Gm24694-201ENSMUST00000180054 110 ntBASIC17.13■□□□□ 0.33
SfswapQ3USH5 Gm27663-201ENSMUST00000184839 110 ntBASIC17.13■□□□□ 0.33
SfswapQ3USH5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Gm20445-201ENSMUST00000061905 565 ntBASIC17.13■□□□□ 0.33
SfswapQ3USH5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SfswapQ3USH5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SfswapQ3USH5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms