Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Mir5126-201ENSMUST00000175513 77 ntBASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 AV026068-213ENSMUST00000223675 1171 ntBASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa3Q3UPR0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gm15590-201ENSMUST00000078419 552 ntBASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.43□□□□□ -0.42
Shisa3Q3UPR0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms