Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm13474-201ENSMUST00000122466 815 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm7370-201ENSMUST00000219471 767 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Gm10566-201ENSMUST00000086739 996 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cks1brtQ3UNC9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms