Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Gm14494-201ENSMUST00000118786 435 ntBASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Gm11025-201ENSMUST00000140773 466 ntBASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brf2Q3UAW9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.57□□□□□ -0.24
Brf2Q3UAW9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf2Q3UAW9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms