Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.5□□□□□ -0.41
Q3U1D9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q3U1D9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.49□□□□□ -0.41
Q3U1D9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.49□□□□□ -0.41
Q3U1D9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Q3U1D9 Gm24694-201ENSMUST00000180054 110 ntBASIC12.49□□□□□ -0.41
Q3U1D9 Gm27663-201ENSMUST00000184839 110 ntBASIC12.49□□□□□ -0.41
Q3U1D9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Q3U1D9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Q3U1D9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.49□□□□□ -0.41
Q3U1D9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Q3U1D9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Q3U1D9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Q3U1D9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.48□□□□□ -0.41
Q3U1D9 Syt7-205ENSMUST00000224135 1557 ntBASIC12.48□□□□□ -0.41
Q3U1D9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.48□□□□□ -0.41
Q3U1D9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Gm4875-201ENSMUST00000118257 786 ntBASIC12.48□□□□□ -0.41
Q3U1D9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Q3U1D9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.48□□□□□ -0.41
Q3U1D9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Q3U1D9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Q3U1D9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Q3U1D9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Q3U1D9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Q3U1D9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.47□□□□□ -0.41
Q3U1D9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Q3U1D9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Q3U1D9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Q3U1D9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms