Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Khdc4Q3TCX3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Khdc4Q3TCX3 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Khdc4Q3TCX3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Gm27920-201ENSMUST00000183953 96 ntBASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Gm27989-201ENSMUST00000184721 107 ntBASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Khdc4Q3TCX3 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm12134-201ENSMUST00000122109 520 ntBASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm18049-201ENSMUST00000208909 581 ntBASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms