Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm7290-201ENSMUST00000104990 617 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm12918-201ENSMUST00000120234 636 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm15710-201ENSMUST00000121821 636 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm5075-201ENSMUST00000196916 622 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Il3ra-202ENSMUST00000223589 738 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.86□□□□□ -0.51
Trim63Q38HM4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim63Q38HM4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim63Q38HM4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.85□□□□□ -0.51
Trim63Q38HM4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim63Q38HM4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms