Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Gm8749-201ENSMUST00000117737 331 ntBASIC13.63□□□□□ -0.23
Nkx3-2P97503 Gm7063-201ENSMUST00000186840 981 ntBASIC13.63□□□□□ -0.23
Nkx3-2P97503 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.63□□□□□ -0.23
Nkx3-2P97503 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx3-2P97503 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.62□□□□□ -0.23
Nkx3-2P97503 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Gm13464-201ENSMUST00000119418 935 ntBASIC13.62□□□□□ -0.23
Nkx3-2P97503 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Gm27618-201ENSMUST00000183671 60 ntBASIC13.62□□□□□ -0.23
Nkx3-2P97503 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Gm28630-201ENSMUST00000187806 498 ntBASIC13.62□□□□□ -0.23
Nkx3-2P97503 Gm18766-201ENSMUST00000189811 808 ntBASIC13.62□□□□□ -0.23
Nkx3-2P97503 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx3-2P97503 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.61□□□□□ -0.23
Nkx3-2P97503 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.61□□□□□ -0.23
Nkx3-2P97503 Gm13453-201ENSMUST00000118708 357 ntBASIC13.61□□□□□ -0.23
Nkx3-2P97503 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.61□□□□□ -0.23
Nkx3-2P97503 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.61□□□□□ -0.23
Nkx3-2P97503 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-2P97503 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-2P97503 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Gm13223-201ENSMUST00000118609 747 ntBASIC13.6□□□□□ -0.23
Nkx3-2P97503 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms