Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nkx2-3P97334 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx2-3P97334 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx2-3P97334 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-3P97334 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.96■□□□□ 0.47
Nkx2-3P97334 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-3P97334 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nkx2-3P97334 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.96■□□□□ 0.46
Nkx2-3P97334 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
Nkx2-3P97334 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm13385-201ENSMUST00000121089 220 ntBASIC17.95■□□□□ 0.46
Nkx2-3P97334 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm8927-201ENSMUST00000181978 981 ntBASIC17.95■□□□□ 0.46
Nkx2-3P97334 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm18905-201ENSMUST00000205454 928 ntBASIC17.95■□□□□ 0.46
Nkx2-3P97334 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm3222-201ENSMUST00000071282 990 ntBASIC17.95■□□□□ 0.46
Nkx2-3P97334 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nkx2-3P97334 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-3P97334 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.94■□□□□ 0.46
Nkx2-3P97334 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Gm26464-201ENSMUST00000157094 305 ntBASIC17.94■□□□□ 0.46
Nkx2-3P97334 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-3P97334 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms