Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vgll3P85442 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vgll3P85442 Mir8112-201ENSMUST00000184382 131 ntBASIC14.79□□□□□ -0.04
Vgll3P85442 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.79□□□□□ -0.04
Vgll3P85442 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.79□□□□□ -0.04
Vgll3P85442 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vgll3P85442 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Vgll3P85442 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vgll3P85442 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vgll3P85442 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Mir7071-201ENSMUST00000184847 69 ntBASIC14.78□□□□□ -0.04
Vgll3P85442 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vgll3P85442 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
Vgll3P85442 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vgll3P85442 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vgll3P85442 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vgll3P85442 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.77□□□□□ -0.04
Vgll3P85442 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vgll3P85442 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vgll3P85442 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vgll3P85442 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.77□□□□□ -0.04
Vgll3P85442 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.77□□□□□ -0.04
Vgll3P85442 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vgll3P85442 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.77□□□□□ -0.05
Vgll3P85442 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Vgll3P85442 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Vgll3P85442 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.77□□□□□ -0.05
Vgll3P85442 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.77□□□□□ -0.05
Vgll3P85442 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Vgll3P85442 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.77□□□□□ -0.05
Vgll3P85442 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.77□□□□□ -0.05
Vgll3P85442 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vgll3P85442 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vgll3P85442 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vgll3P85442 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.76□□□□□ -0.05
Vgll3P85442 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.76□□□□□ -0.05
Vgll3P85442 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.76□□□□□ -0.05
Vgll3P85442 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.76□□□□□ -0.05
Vgll3P85442 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.76□□□□□ -0.05
Vgll3P85442 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 AC124433.1-202ENSMUST00000224762 1535 ntBASIC14.76□□□□□ -0.05
Vgll3P85442 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.76□□□□□ -0.05
Vgll3P85442 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vgll3P85442 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vgll3P85442 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vgll3P85442 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vgll3P85442 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vgll3P85442 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms