Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.85□□□□□ -0.35
SgcbP82349 Gm22175-201ENSMUST00000175007 78 ntBASIC12.85□□□□□ -0.35
SgcbP82349 Mir6956-201ENSMUST00000183598 62 ntBASIC12.85□□□□□ -0.35
SgcbP82349 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.85□□□□□ -0.35
SgcbP82349 Gm44872-201ENSMUST00000207864 420 ntBASIC12.85□□□□□ -0.35
SgcbP82349 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.85□□□□□ -0.35
SgcbP82349 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcbP82349 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SgcbP82349 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.85□□□□□ -0.35
SgcbP82349 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SgcbP82349 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SgcbP82349 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Gm6415-201ENSMUST00000118488 348 ntBASIC12.84□□□□□ -0.35
SgcbP82349 Gm15920-201ENSMUST00000118998 402 ntBASIC12.84□□□□□ -0.35
SgcbP82349 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.84□□□□□ -0.35
SgcbP82349 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.84□□□□□ -0.35
SgcbP82349 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SgcbP82349 Gm25007-201ENSMUST00000083808 133 ntBASIC12.84□□□□□ -0.35
SgcbP82349 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SgcbP82349 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SgcbP82349 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.84□□□□□ -0.35
SgcbP82349 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SgcbP82349 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
SgcbP82349 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcbP82349 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SgcbP82349 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SgcbP82349 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.83□□□□□ -0.35
SgcbP82349 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SgcbP82349 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.83□□□□□ -0.36
SgcbP82349 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.83□□□□□ -0.36
SgcbP82349 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SgcbP82349 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SgcbP82349 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.83□□□□□ -0.36
SgcbP82349 Gm37230-201ENSMUST00000194491 818 ntBASIC12.83□□□□□ -0.36
SgcbP82349 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SgcbP82349 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SgcbP82349 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms