Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Msx3P70354 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Msx3P70354 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Gm11779-201ENSMUST00000118541 368 ntBASIC14.8□□□□□ -0.04
Msx3P70354 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.8□□□□□ -0.04
Msx3P70354 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.8□□□□□ -0.04
Msx3P70354 Gm20553-201ENSMUST00000204205 844 ntBASIC14.8□□□□□ -0.04
Msx3P70354 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Msx3P70354 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Msx3P70354 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Msx3P70354 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Gm14494-201ENSMUST00000118786 435 ntBASIC14.79□□□□□ -0.04
Msx3P70354 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.79□□□□□ -0.04
Msx3P70354 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.79□□□□□ -0.04
Msx3P70354 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.79□□□□□ -0.04
Msx3P70354 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
Msx3P70354 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.79□□□□□ -0.04
Msx3P70354 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.79□□□□□ -0.04
Msx3P70354 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.79□□□□□ -0.04
Msx3P70354 Gm44771-201ENSMUST00000206975 626 ntBASIC14.79□□□□□ -0.04
Msx3P70354 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.79□□□□□ -0.04
Msx3P70354 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Msx3P70354 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.78□□□□□ -0.04
Msx3P70354 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Msx3P70354 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.78□□□□□ -0.04
Msx3P70354 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.78□□□□□ -0.04
Msx3P70354 Gm10175-201ENSMUST00000086013 645 ntBASIC14.78□□□□□ -0.04
Msx3P70354 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.78□□□□□ -0.04
Msx3P70354 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Msx3P70354 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.78□□□□□ -0.04
Msx3P70354 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.77□□□□□ -0.04
Msx3P70354 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms