Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Gm15427-201ENSMUST00000117288 531 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Gm27301-201ENSMUST00000184012 127 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Gm44335-201ENSMUST00000196879 141 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Gm44297-201ENSMUST00000198304 141 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Gm44346-201ENSMUST00000198851 141 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smad1P70340 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smad1P70340 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smad1P70340 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smad1P70340 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Smad1P70340 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.86□□□□□ -0.03
Smad1P70340 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smad1P70340 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Smad1P70340 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smad1P70340 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smad1P70340 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.85□□□□□ -0.03
Smad1P70340 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.85□□□□□ -0.03
Smad1P70340 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.85□□□□□ -0.03
Smad1P70340 Gm13365-201ENSMUST00000121188 973 ntBASIC14.85□□□□□ -0.03
Smad1P70340 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
Smad1P70340 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.85□□□□□ -0.03
Smad1P70340 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.85□□□□□ -0.03
Smad1P70340 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.85□□□□□ -0.03
Smad1P70340 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smad1P70340 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smad1P70340 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.85□□□□□ -0.03
Smad1P70340 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Smad1P70340 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.85□□□□□ -0.03
Smad1P70340 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smad1P70340 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.84□□□□□ -0.03
Smad1P70340 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.84□□□□□ -0.03
Smad1P70340 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smad1P70340 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Smad1P70340 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.84□□□□□ -0.03
Smad1P70340 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.84□□□□□ -0.03
Smad1P70340 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.84□□□□□ -0.03
Smad1P70340 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.84□□□□□ -0.03
Smad1P70340 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smad1P70340 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smad1P70340 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smad1P70340 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smad1P70340 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.84□□□□□ -0.03
Smad1P70340 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.83□□□□□ -0.03
Smad1P70340 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.83□□□□□ -0.03
Smad1P70340 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Smad1P70340 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smad1P70340 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smad1P70340 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smad1P70340 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms