Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.99□□□□□ -0.65
Vamp3P63024 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Gm14117-201ENSMUST00000122417 843 ntBASIC10.99□□□□□ -0.65
Vamp3P63024 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC10.99□□□□□ -0.65
Vamp3P63024 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.99□□□□□ -0.65
Vamp3P63024 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Vamp3P63024 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.99□□□□□ -0.65
Vamp3P63024 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.98□□□□□ -0.65
Vamp3P63024 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.98□□□□□ -0.65
Vamp3P63024 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vamp3P63024 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.98□□□□□ -0.65
Vamp3P63024 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Vamp3P63024 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Vamp3P63024 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vamp3P63024 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vamp3P63024 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.97□□□□□ -0.65
Vamp3P63024 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.97□□□□□ -0.65
Vamp3P63024 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Gm6211-202ENSMUST00000167849 925 ntBASIC10.97□□□□□ -0.65
Vamp3P63024 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.97□□□□□ -0.65
Vamp3P63024 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vamp3P63024 Gm37292-201ENSMUST00000192062 758 ntBASIC10.97□□□□□ -0.65
Vamp3P63024 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms