Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.72□□□□□ -0.05
Ybx1P62960 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.72□□□□□ -0.05
Ybx1P62960 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.72□□□□□ -0.05
Ybx1P62960 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.72□□□□□ -0.05
Ybx1P62960 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ybx1P62960 Gm8602-201ENSMUST00000184045 607 ntBASIC14.72□□□□□ -0.05
Ybx1P62960 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.72□□□□□ -0.05
Ybx1P62960 AA619741-201ENSMUST00000195095 646 ntBASIC14.72□□□□□ -0.05
Ybx1P62960 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.72□□□□□ -0.05
Ybx1P62960 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.72□□□□□ -0.05
Ybx1P62960 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ybx1P62960 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ybx1P62960 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.72□□□□□ -0.05
Ybx1P62960 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ybx1P62960 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ybx1P62960 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ybx1P62960 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.72□□□□□ -0.05
Ybx1P62960 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ybx1P62960 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ybx1P62960 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.71□□□□□ -0.05
Ybx1P62960 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Ybx1P62960 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.71□□□□□ -0.05
Ybx1P62960 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.71□□□□□ -0.05
Ybx1P62960 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.71□□□□□ -0.05
Ybx1P62960 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ybx1P62960 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ybx1P62960 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ybx1P62960 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ybx1P62960 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.7□□□□□ -0.06
Ybx1P62960 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.7□□□□□ -0.06
Ybx1P62960 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ybx1P62960 Mir6392-201ENSMUST00000184924 108 ntBASIC14.7□□□□□ -0.06
Ybx1P62960 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.7□□□□□ -0.06
Ybx1P62960 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.7□□□□□ -0.06
Ybx1P62960 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.7□□□□□ -0.06
Ybx1P62960 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ybx1P62960 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ybx1P62960 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.7□□□□□ -0.06
Ybx1P62960 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms