Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.27□□□□□ -0.77
Rpl39P62892 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.27□□□□□ -0.77
Rpl39P62892 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.27□□□□□ -0.77
Rpl39P62892 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rpl39P62892 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rpl39P62892 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.27□□□□□ -0.77
Rpl39P62892 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Rpl39P62892 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.27□□□□□ -0.77
Rpl39P62892 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rpl39P62892 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rpl39P62892 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rpl39P62892 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rpl39P62892 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rpl39P62892 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rpl39P62892 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.26□□□□□ -0.77
Rpl39P62892 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Gm10252-201ENSMUST00000209541 832 ntBASIC10.26□□□□□ -0.77
Rpl39P62892 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.26□□□□□ -0.77
Rpl39P62892 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.26□□□□□ -0.77
Rpl39P62892 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rpl39P62892 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rpl39P62892 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rpl39P62892 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rpl39P62892 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Rpl39P62892 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rpl39P62892 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rpl39P62892 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms