Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Gm2810-201ENSMUST00000118681 990 ntBASIC12.63□□□□□ -0.39
Lsm6P62313 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Rprl2-201ENSMUST00000157150 290 ntBASIC12.63□□□□□ -0.39
Lsm6P62313 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.63□□□□□ -0.39
Lsm6P62313 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.63□□□□□ -0.39
Lsm6P62313 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm6P62313 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lsm6P62313 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lsm6P62313 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Lsm6P62313 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm6P62313 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lsm6P62313 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm6P62313 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lsm6P62313 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.62□□□□□ -0.39
Lsm6P62313 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.62□□□□□ -0.39
Lsm6P62313 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.62□□□□□ -0.39
Lsm6P62313 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.62□□□□□ -0.39
Lsm6P62313 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.62□□□□□ -0.39
Lsm6P62313 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.62□□□□□ -0.39
Lsm6P62313 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm6P62313 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.62□□□□□ -0.39
Lsm6P62313 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm6P62313 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm6P62313 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.61□□□□□ -0.39
Lsm6P62313 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm6P62313 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm6P62313 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm6P62313 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms