Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sf3b6P59708 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3b6P59708 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.77□□□□□ -0.36
Sf3b6P59708 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.77□□□□□ -0.37
Sf3b6P59708 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sf3b6P59708 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Gm18733-201ENSMUST00000173950 856 ntBASIC12.77□□□□□ -0.37
Sf3b6P59708 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.77□□□□□ -0.37
Sf3b6P59708 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.77□□□□□ -0.37
Sf3b6P59708 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.77□□□□□ -0.37
Sf3b6P59708 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sf3b6P59708 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Sf3b6P59708 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.77□□□□□ -0.37
Sf3b6P59708 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3b6P59708 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.76□□□□□ -0.37
Sf3b6P59708 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Gm13418-201ENSMUST00000119097 944 ntBASIC12.76□□□□□ -0.37
Sf3b6P59708 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Gm37153-201ENSMUST00000193637 231 ntBASIC12.76□□□□□ -0.37
Sf3b6P59708 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.76□□□□□ -0.37
Sf3b6P59708 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Sf3b6P59708 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3b6P59708 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms