Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.08■□□□□ 0.16
Tpm1P58771 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.07■□□□□ 0.16
Tpm1P58771 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Tpm1P58771 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.07■□□□□ 0.16
Tpm1P58771 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.07■□□□□ 0.16
Tpm1P58771 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tpm1P58771 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm1P58771 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.06■□□□□ 0.16
Tpm1P58771 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.06■□□□□ 0.16
Tpm1P58771 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.06■□□□□ 0.16
Tpm1P58771 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Tpm1P58771 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Tpm1P58771 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.06■□□□□ 0.16
Tpm1P58771 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.06■□□□□ 0.16
Tpm1P58771 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Tpm1P58771 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm1P58771 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm1P58771 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tpm1P58771 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.05■□□□□ 0.16
Tpm1P58771 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.05■□□□□ 0.16
Tpm1P58771 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tpm1P58771 Gm17807-201ENSMUST00000186869 298 ntBASIC16.05■□□□□ 0.16
Tpm1P58771 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.05■□□□□ 0.16
Tpm1P58771 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm1P58771 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm1P58771 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Tpm1P58771 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tpm1P58771 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm1P58771 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.04■□□□□ 0.16
Tpm1P58771 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.04■□□□□ 0.16
Tpm1P58771 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tpm1P58771 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tpm1P58771 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.04■□□□□ 0.16
Tpm1P58771 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms