Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abcd3P55096 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Abcd3P55096 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abcd3P55096 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abcd3P55096 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abcd3P55096 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abcd3P55096 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.88□□□□□ -0.35
Abcd3P55096 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.88□□□□□ -0.35
Abcd3P55096 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.88□□□□□ -0.35
Abcd3P55096 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.88□□□□□ -0.35
Abcd3P55096 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.88□□□□□ -0.35
Abcd3P55096 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.88□□□□□ -0.35
Abcd3P55096 Gm18737-201ENSMUST00000173594 937 ntBASIC12.88□□□□□ -0.35
Abcd3P55096 Gm5264-201ENSMUST00000190584 848 ntBASIC12.88□□□□□ -0.35
Abcd3P55096 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.88□□□□□ -0.35
Abcd3P55096 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Abcd3P55096 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Abcd3P55096 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.88□□□□□ -0.35
Abcd3P55096 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Abcd3P55096 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abcd3P55096 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Abcd3P55096 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.87□□□□□ -0.35
Abcd3P55096 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Abcd3P55096 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Abcd3P55096 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Abcd3P55096 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Abcd3P55096 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.87□□□□□ -0.35
Abcd3P55096 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.87□□□□□ -0.35
Abcd3P55096 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.87□□□□□ -0.35
Abcd3P55096 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.87□□□□□ -0.35
Abcd3P55096 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.87□□□□□ -0.35
Abcd3P55096 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Abcd3P55096 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Abcd3P55096 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Abcd3P55096 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.87□□□□□ -0.35
Abcd3P55096 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.87□□□□□ -0.35
Abcd3P55096 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abcd3P55096 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.86□□□□□ -0.35
Abcd3P55096 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Abcd3P55096 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
Abcd3P55096 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.86□□□□□ -0.35
Abcd3P55096 Gm18057-201ENSMUST00000208220 503 ntBASIC12.86□□□□□ -0.35
Abcd3P55096 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.86□□□□□ -0.35
Abcd3P55096 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms