Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm10275-202ENSMUST00000168697 495 ntBASIC14.25□□□□□ -0.13
Pdx1P52946 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdx1P52946 Gm18049-201ENSMUST00000208909 581 ntBASIC14.25□□□□□ -0.13
Pdx1P52946 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gm10275-201ENSMUST00000092620 635 ntBASIC14.25□□□□□ -0.13
Pdx1P52946 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdx1P52946 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdx1P52946 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdx1P52946 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pdx1P52946 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pdx1P52946 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.24□□□□□ -0.13
Pdx1P52946 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.24□□□□□ -0.13
Pdx1P52946 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdx1P52946 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Gm9824-201ENSMUST00000178707 561 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdx1P52946 Gm29310-201ENSMUST00000185468 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21825-201ENSMUST00000185728 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm29109-201ENSMUST00000185895 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21896-201ENSMUST00000186520 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21873-201ENSMUST00000186728 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21794-201ENSMUST00000187056 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21880-201ENSMUST00000187275 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21826-201ENSMUST00000187451 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21198-201ENSMUST00000188393 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21749-201ENSMUST00000189343 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21901-201ENSMUST00000189568 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm29424-201ENSMUST00000189716 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm28599-201ENSMUST00000189838 694 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21867-201ENSMUST00000189917 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm29269-201ENSMUST00000190087 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21722-201ENSMUST00000190153 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm28423-201ENSMUST00000190701 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21899-201ENSMUST00000190745 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21910-201ENSMUST00000191163 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21849-201ENSMUST00000191571 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm28678-201ENSMUST00000191593 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm20910-201ENSMUST00000193268 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm21871-201ENSMUST00000194621 696 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Gm5779-201ENSMUST00000218467 910 ntBASIC14.24□□□□□ -0.13
Pdx1P52946 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdx1P52946 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pdx1P52946 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pdx1P52946 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdx1P52946 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Pdx1P52946 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.23□□□□□ -0.13
Pdx1P52946 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pdx1P52946 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pdx1P52946 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pdx1P52946 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Mir449b-201ENSMUST00000104833 80 ntBASIC14.23□□□□□ -0.13
Pdx1P52946 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdx1P52946 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdx1P52946 Gm24158-201ENSMUST00000175263 71 ntBASIC14.23□□□□□ -0.13
Pdx1P52946 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.23□□□□□ -0.13
Pdx1P52946 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms