Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.63□□□□□ -0.23
RoraP51448 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.63□□□□□ -0.23
RoraP51448 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.63□□□□□ -0.23
RoraP51448 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.63□□□□□ -0.23
RoraP51448 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RoraP51448 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Gm7775-201ENSMUST00000218871 853 ntBASIC13.63□□□□□ -0.23
RoraP51448 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.63□□□□□ -0.23
RoraP51448 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.63□□□□□ -0.23
RoraP51448 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
RoraP51448 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.62□□□□□ -0.23
RoraP51448 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Gm9726-201ENSMUST00000180321 678 ntBASIC13.62□□□□□ -0.23
RoraP51448 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Gm37230-201ENSMUST00000194491 818 ntBASIC13.62□□□□□ -0.23
RoraP51448 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.62□□□□□ -0.23
RoraP51448 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RoraP51448 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.62□□□□□ -0.23
RoraP51448 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RoraP51448 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RoraP51448 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.61□□□□□ -0.23
RoraP51448 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.61□□□□□ -0.23
RoraP51448 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Gm9182-201ENSMUST00000217829 639 ntBASIC13.61□□□□□ -0.23
RoraP51448 Shd-206ENSMUST00000225145 998 ntBASIC13.61□□□□□ -0.23
RoraP51448 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
RoraP51448 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RoraP51448 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RoraP51448 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RoraP51448 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms