Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh2P43247 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh2P43247 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Msh2P43247 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msh2P43247 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msh2P43247 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msh2P43247 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msh2P43247 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Msh2P43247 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.83□□□□□ -0.04
Msh2P43247 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.83□□□□□ -0.04
Msh2P43247 Gm14494-201ENSMUST00000118786 435 ntBASIC14.83□□□□□ -0.04
Msh2P43247 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.83□□□□□ -0.04
Msh2P43247 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.83□□□□□ -0.04
Msh2P43247 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.83□□□□□ -0.04
Msh2P43247 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Msh2P43247 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.83□□□□□ -0.04
Msh2P43247 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
Msh2P43247 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Msh2P43247 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.83□□□□□ -0.04
Msh2P43247 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.83□□□□□ -0.04
Msh2P43247 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh2P43247 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Msh2P43247 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.82□□□□□ -0.04
Msh2P43247 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Msh2P43247 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.82□□□□□ -0.04
Msh2P43247 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.82□□□□□ -0.04
Msh2P43247 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Msh2P43247 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh2P43247 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.82□□□□□ -0.04
Msh2P43247 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Msh2P43247 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.81□□□□□ -0.04
Msh2P43247 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msh2P43247 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Mir8117-201ENSMUST00000184773 107 ntBASIC14.81□□□□□ -0.04
Msh2P43247 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.81□□□□□ -0.04
Msh2P43247 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.81□□□□□ -0.04
Msh2P43247 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Msh2P43247 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Msh2P43247 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Msh2P43247 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msh2P43247 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msh2P43247 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Msh2P43247 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Msh2P43247 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms