Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 AC153962.4-201ENSMUST00000217878 242 ntBASIC12□□□□□ -0.49
Abca1P41233 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12□□□□□ -0.49
Abca1P41233 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Syt7-204ENSMUST00000223586 1344 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.99□□□□□ -0.49
Abca1P41233 Gm5566-201ENSMUST00000116118 459 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Abca1P41233 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Asic1-205ENSMUST00000228185 1818 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Abca1P41233 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.99□□□□□ -0.49
Abca1P41233 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.99□□□□□ -0.49
Abca1P41233 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.99□□□□□ -0.49
Abca1P41233 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Abca1P41233 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Abca1P41233 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Abca1P41233 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.98□□□□□ -0.49
Abca1P41233 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.98□□□□□ -0.49
Abca1P41233 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.98□□□□□ -0.49
Abca1P41233 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.98□□□□□ -0.49
Abca1P41233 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.98□□□□□ -0.49
Abca1P41233 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Abca1P41233 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.98□□□□□ -0.49
Abca1P41233 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.98□□□□□ -0.49
Abca1P41233 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.98□□□□□ -0.49
Abca1P41233 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Abca1P41233 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Gm4875-201ENSMUST00000118257 786 ntBASIC11.98□□□□□ -0.49
Abca1P41233 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Abca1P41233 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Abca1P41233 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Abca1P41233 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.98□□□□□ -0.49
Abca1P41233 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Abca1P41233 Gm45384-201ENSMUST00000210451 277 ntBASIC11.98□□□□□ -0.49
Abca1P41233 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms