Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Fen1P39749 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.5□□□□□ -0.09
Fen1P39749 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.5□□□□□ -0.09
Fen1P39749 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.5□□□□□ -0.09
Fen1P39749 Gm18489-201ENSMUST00000172565 551 ntBASIC14.5□□□□□ -0.09
Fen1P39749 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.5□□□□□ -0.09
Fen1P39749 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Gm6443-201ENSMUST00000203599 874 ntBASIC14.5□□□□□ -0.09
Fen1P39749 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.5□□□□□ -0.09
Fen1P39749 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.5□□□□□ -0.09
Fen1P39749 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Fen1P39749 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Fen1P39749 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Fen1P39749 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Fen1P39749 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.49□□□□□ -0.09
Fen1P39749 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.49□□□□□ -0.09
Fen1P39749 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Fen1P39749 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.49□□□□□ -0.09
Fen1P39749 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.49□□□□□ -0.09
Fen1P39749 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.49□□□□□ -0.09
Fen1P39749 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fen1P39749 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fen1P39749 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fen1P39749 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Fen1P39749 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Fen1P39749 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Fen1P39749 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Gm13418-201ENSMUST00000119097 944 ntBASIC14.48□□□□□ -0.09
Fen1P39749 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Fen1P39749 Gm9682-201ENSMUST00000197505 556 ntBASIC14.48□□□□□ -0.09
Fen1P39749 Gm43514-201ENSMUST00000198852 424 ntBASIC14.48□□□□□ -0.09
Fen1P39749 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.48□□□□□ -0.09
Fen1P39749 Gm18195-201ENSMUST00000207604 706 ntBASIC14.48□□□□□ -0.09
Fen1P39749 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Fen1P39749 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fen1P39749 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Fen1P39749 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fen1P39749 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fen1P39749 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fen1P39749 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fen1P39749 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms