Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh4P39038 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.79□□□□□ -0.2
Cdh4P39038 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.79□□□□□ -0.2
Cdh4P39038 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh4P39038 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh4P39038 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.79□□□□□ -0.2
Cdh4P39038 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdh4P39038 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cdh4P39038 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Cdh4P39038 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh4P39038 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdh4P39038 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdh4P39038 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.78□□□□□ -0.2
Cdh4P39038 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Gm5779-201ENSMUST00000218467 910 ntBASIC13.78□□□□□ -0.2
Cdh4P39038 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.78□□□□□ -0.2
Cdh4P39038 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh4P39038 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
Cdh4P39038 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdh4P39038 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh4P39038 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Cdh4P39038 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh4P39038 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdh4P39038 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cdh4P39038 Gm13015-201ENSMUST00000118674 204 ntBASIC13.77□□□□□ -0.21
Cdh4P39038 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Gm25948-201ENSMUST00000175334 112 ntBASIC13.77□□□□□ -0.21
Cdh4P39038 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Gm27430-201ENSMUST00000184585 107 ntBASIC13.77□□□□□ -0.21
Cdh4P39038 Gm44333-201ENSMUST00000197168 107 ntBASIC13.77□□□□□ -0.21
Cdh4P39038 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.77□□□□□ -0.21
Cdh4P39038 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdh4P39038 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms