Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.33□□□□□ -0.12
LdlrP35951 Gm18246-201ENSMUST00000221023 728 ntBASIC14.33□□□□□ -0.12
LdlrP35951 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LdlrP35951 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LdlrP35951 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LdlrP35951 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LdlrP35951 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LdlrP35951 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.32□□□□□ -0.12
LdlrP35951 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LdlrP35951 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LdlrP35951 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
LdlrP35951 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LdlrP35951 Gm27300-201ENSMUST00000184085 97 ntBASIC14.32□□□□□ -0.12
LdlrP35951 Gm27335-201ENSMUST00000184758 97 ntBASIC14.32□□□□□ -0.12
LdlrP35951 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.32□□□□□ -0.12
LdlrP35951 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.32□□□□□ -0.12
LdlrP35951 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.32□□□□□ -0.12
LdlrP35951 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.32□□□□□ -0.12
LdlrP35951 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.32□□□□□ -0.12
LdlrP35951 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.32□□□□□ -0.12
LdlrP35951 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LdlrP35951 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
LdlrP35951 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LdlrP35951 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
LdlrP35951 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.31□□□□□ -0.12
LdlrP35951 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.31□□□□□ -0.12
LdlrP35951 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LdlrP35951 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.31□□□□□ -0.12
LdlrP35951 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.31□□□□□ -0.12
LdlrP35951 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
LdlrP35951 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LdlrP35951 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LdlrP35951 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
LdlrP35951 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms