Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.25□□□□□ -0.29
Sftpa1P35242 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.25□□□□□ -0.29
Sftpa1P35242 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.25□□□□□ -0.29
Sftpa1P35242 Gm18307-201ENSMUST00000206864 949 ntBASIC13.25□□□□□ -0.29
Sftpa1P35242 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.25□□□□□ -0.29
Sftpa1P35242 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.25□□□□□ -0.29
Sftpa1P35242 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sftpa1P35242 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sftpa1P35242 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sftpa1P35242 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.24□□□□□ -0.29
Sftpa1P35242 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.24□□□□□ -0.29
Sftpa1P35242 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sftpa1P35242 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Sftpa1P35242 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.23□□□□□ -0.29
Sftpa1P35242 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sftpa1P35242 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Gm8062-201ENSMUST00000139696 444 ntBASIC13.23□□□□□ -0.29
Sftpa1P35242 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sftpa1P35242 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
Sftpa1P35242 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.23□□□□□ -0.29
Sftpa1P35242 Gm17795-201ENSMUST00000214505 757 ntBASIC13.23□□□□□ -0.29
Sftpa1P35242 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.23□□□□□ -0.29
Sftpa1P35242 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.23□□□□□ -0.29
Sftpa1P35242 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.23□□□□□ -0.29
Sftpa1P35242 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sftpa1P35242 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sftpa1P35242 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.22□□□□□ -0.29
Sftpa1P35242 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.22□□□□□ -0.29
Sftpa1P35242 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sftpa1P35242 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sftpa1P35242 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms