Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vcam1P29533 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.46■□□□□ 0.23
Vcam1P29533 Mir7654-201ENSMUST00000185082 70 ntBASIC16.46■□□□□ 0.23
Vcam1P29533 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.46■□□□□ 0.23
Vcam1P29533 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.46■□□□□ 0.23
Vcam1P29533 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.46■□□□□ 0.23
Vcam1P29533 Gm5425-201ENSMUST00000214125 459 ntBASIC16.46■□□□□ 0.23
Vcam1P29533 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcam1P29533 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcam1P29533 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Vcam1P29533 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vcam1P29533 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.45■□□□□ 0.22
Vcam1P29533 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.45■□□□□ 0.22
Vcam1P29533 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.45■□□□□ 0.22
Vcam1P29533 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.45■□□□□ 0.22
Vcam1P29533 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.45■□□□□ 0.22
Vcam1P29533 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.45■□□□□ 0.22
Vcam1P29533 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vcam1P29533 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
Vcam1P29533 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcam1P29533 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.44■□□□□ 0.22
Vcam1P29533 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.44■□□□□ 0.22
Vcam1P29533 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.44■□□□□ 0.22
Vcam1P29533 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Gm27701-201ENSMUST00000184498 110 ntBASIC16.44■□□□□ 0.22
Vcam1P29533 Gm43433-201ENSMUST00000196573 481 ntBASIC16.44■□□□□ 0.22
Vcam1P29533 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.44■□□□□ 0.22
Vcam1P29533 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.44■□□□□ 0.22
Vcam1P29533 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vcam1P29533 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcam1P29533 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vcam1P29533 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Vcam1P29533 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vcam1P29533 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.43■□□□□ 0.22
Vcam1P29533 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.43■□□□□ 0.22
Vcam1P29533 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.43■□□□□ 0.22
Vcam1P29533 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Vcam1P29533 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.43■□□□□ 0.22
Vcam1P29533 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcam1P29533 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.43■□□□□ 0.22
Vcam1P29533 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.42■□□□□ 0.22
Vcam1P29533 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Vcam1P29533 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.42■□□□□ 0.22
Vcam1P29533 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.42■□□□□ 0.22
Vcam1P29533 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcam1P29533 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.42■□□□□ 0.22
Vcam1P29533 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vcam1P29533 Gm28911-201ENSMUST00000188837 117 ntBASIC16.42■□□□□ 0.22
Vcam1P29533 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.42■□□□□ 0.22
Vcam1P29533 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms