Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm14701-201ENSMUST00000117156 348 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm18057-201ENSMUST00000208220 503 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.3□□□□□ -0.28
Cd40lgP27548 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd40lgP27548 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.29□□□□□ -0.28
Cd40lgP27548 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.29□□□□□ -0.28
Cd40lgP27548 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Gm11745-201ENSMUST00000121669 448 ntBASIC13.29□□□□□ -0.28
Cd40lgP27548 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Chchd1-203ENSMUST00000224633 557 ntBASIC13.29□□□□□ -0.28
Cd40lgP27548 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cd40lgP27548 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.29□□□□□ -0.28
Cd40lgP27548 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.29□□□□□ -0.28
Cd40lgP27548 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cd40lgP27548 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd40lgP27548 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cd40lgP27548 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.28□□□□□ -0.28
Cd40lgP27548 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.28□□□□□ -0.28
Cd40lgP27548 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cd40lgP27548 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.28□□□□□ -0.28
Cd40lgP27548 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd40lgP27548 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms