Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Gm14701-201ENSMUST00000117156 348 ntBASIC13.03□□□□□ -0.32
Cd40P27512 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.03□□□□□ -0.32
Cd40P27512 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.03□□□□□ -0.32
Cd40P27512 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cd40P27512 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cd40P27512 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.03□□□□□ -0.32
Cd40P27512 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40P27512 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cd40P27512 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.02□□□□□ -0.32
Cd40P27512 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40P27512 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.02□□□□□ -0.32
Cd40P27512 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.02□□□□□ -0.33
Cd40P27512 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Gm18766-201ENSMUST00000189811 808 ntBASIC13.02□□□□□ -0.33
Cd40P27512 Gm29541-201ENSMUST00000191351 678 ntBASIC13.02□□□□□ -0.33
Cd40P27512 AA619741-201ENSMUST00000195095 646 ntBASIC13.02□□□□□ -0.33
Cd40P27512 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cd40P27512 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cd40P27512 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Cd40P27512 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cd40P27512 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40P27512 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.01□□□□□ -0.33
Cd40P27512 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd40P27512 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd40P27512 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cd40P27512 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Cd40P27512 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cd40P27512 Gm15693-201ENSMUST00000120470 637 ntBASIC13.01□□□□□ -0.33
Cd40P27512 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.01□□□□□ -0.33
Cd40P27512 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cd40P27512 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cd40P27512 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd40P27512 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd40P27512 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13□□□□□ -0.33
Cd40P27512 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms