Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1aP25118 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm2451-201ENSMUST00000199447 999 ntBASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm10290-201ENSMUST00000200451 999 ntBASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf1aP25118 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Gm18206-201ENSMUST00000207027 926 ntBASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf1aP25118 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms