Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
BdnfP21237 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.82□□□□□ -0.2
BdnfP21237 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BdnfP21237 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
BdnfP21237 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.82□□□□□ -0.2
BdnfP21237 Gm27300-201ENSMUST00000184085 97 ntBASIC13.82□□□□□ -0.2
BdnfP21237 Gm27335-201ENSMUST00000184758 97 ntBASIC13.82□□□□□ -0.2
BdnfP21237 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.82□□□□□ -0.2
BdnfP21237 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.82□□□□□ -0.2
BdnfP21237 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.82□□□□□ -0.2
BdnfP21237 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
BdnfP21237 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Gm8749-201ENSMUST00000117737 331 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Mir5126-201ENSMUST00000175513 77 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.81□□□□□ -0.2
BdnfP21237 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
BdnfP21237 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BdnfP21237 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
BdnfP21237 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
BdnfP21237 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
BdnfP21237 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.8□□□□□ -0.2
BdnfP21237 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
BdnfP21237 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms