Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Gm17271-201ENSMUST00000165535 355 ntBASIC12.82□□□□□ -0.36
P20040 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.82□□□□□ -0.36
P20040 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P20040 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P20040 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.82□□□□□ -0.36
P20040 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P20040 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.82□□□□□ -0.36
P20040 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.81□□□□□ -0.36
P20040 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.81□□□□□ -0.36
P20040 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.81□□□□□ -0.36
P20040 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P20040 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.81□□□□□ -0.36
P20040 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.81□□□□□ -0.36
P20040 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.81□□□□□ -0.36
P20040 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P20040 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
P20040 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.81□□□□□ -0.36
P20040 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P20040 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.81□□□□□ -0.36
P20040 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P20040 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P20040 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P20040 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
P20040 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.8□□□□□ -0.36
P20040 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.8□□□□□ -0.36
P20040 Gm2756-201ENSMUST00000195851 400 ntBASIC12.8□□□□□ -0.36
P20040 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.8□□□□□ -0.36
P20040 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Gm10175-201ENSMUST00000086013 645 ntBASIC12.8□□□□□ -0.36
P20040 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.8□□□□□ -0.36
P20040 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.8□□□□□ -0.36
P20040 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.8□□□□□ -0.36
P20040 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P20040 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P20040 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.79□□□□□ -0.36
P20040 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.79□□□□□ -0.36
P20040 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P20040 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms