Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Gm14042-201ENSMUST00000120139 833 ntBASIC16.64■□□□□ 0.25
Usp53P15975 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 AA619741-201ENSMUST00000195095 646 ntBASIC16.64■□□□□ 0.25
Usp53P15975 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.64■□□□□ 0.25
Usp53P15975 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp53P15975 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp53P15975 Syt7-204ENSMUST00000223586 1344 ntBASIC16.64■□□□□ 0.25
Usp53P15975 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.64■□□□□ 0.25
Usp53P15975 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp53P15975 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp53P15975 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp53P15975 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Usp53P15975 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp53P15975 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.63■□□□□ 0.25
Usp53P15975 Gm29667-201ENSMUST00000190817 490 ntBASIC16.63■□□□□ 0.25
Usp53P15975 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.63■□□□□ 0.25
Usp53P15975 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp53P15975 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.63■□□□□ 0.25
Usp53P15975 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.63■□□□□ 0.25
Usp53P15975 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp53P15975 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp53P15975 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp53P15975 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp53P15975 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp53P15975 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.62■□□□□ 0.25
Usp53P15975 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp53P15975 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp53P15975 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.62■□□□□ 0.25
Usp53P15975 Gm27838-201ENSMUST00000184829 128 ntBASIC16.62■□□□□ 0.25
Usp53P15975 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp53P15975 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.62■□□□□ 0.25
Usp53P15975 Gm9229-201ENSMUST00000222777 126 ntBASIC16.62■□□□□ 0.25
Usp53P15975 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.62■□□□□ 0.25
Usp53P15975 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp53P15975 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp53P15975 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Gm15321-201ENSMUST00000121290 288 ntBASIC16.61■□□□□ 0.25
Usp53P15975 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Usp53P15975 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp53P15975 Gm44855-201ENSMUST00000205725 362 ntBASIC16.61■□□□□ 0.25
Usp53P15975 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.61■□□□□ 0.25
Usp53P15975 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp53P15975 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp53P15975 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp53P15975 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp53P15975 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms