Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Gm15920-201ENSMUST00000118998 402 ntBASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ly6c1P0CW02 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Gm6222-201ENSMUST00000120787 396 ntBASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Gm9719-201ENSMUST00000162765 543 ntBASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Gm44872-201ENSMUST00000207864 420 ntBASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.05□□□□□ -0.48
Ly6c1P0CW02 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ly6c1P0CW02 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Gm5566-201ENSMUST00000116118 459 ntBASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Gm25925-201ENSMUST00000158314 306 ntBASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Gm27622-201ENSMUST00000183779 60 ntBASIC12.04□□□□□ -0.48
Ly6c1P0CW02 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ly6c1P0CW02 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ly6c1P0CW02 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ly6c1P0CW02 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ly6c1P0CW02 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms