Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.53■□□□□ 0.56
Hoxc9P09633 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hoxc9P09633 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Gm4984-201ENSMUST00000115987 360 ntBASIC18.53■□□□□ 0.56
Hoxc9P09633 Gm13385-201ENSMUST00000121089 220 ntBASIC18.53■□□□□ 0.56
Hoxc9P09633 Gm15376-201ENSMUST00000122258 783 ntBASIC18.53■□□□□ 0.56
Hoxc9P09633 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.53■□□□□ 0.56
Hoxc9P09633 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.53■□□□□ 0.56
Hoxc9P09633 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hoxc9P09633 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc9P09633 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.52■□□□□ 0.56
Hoxc9P09633 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Gm12390-201ENSMUST00000117897 397 ntBASIC18.52■□□□□ 0.56
Hoxc9P09633 Mir1894-201ENSMUST00000122802 81 ntBASIC18.52■□□□□ 0.56
Hoxc9P09633 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.52■□□□□ 0.56
Hoxc9P09633 Gm43630-201ENSMUST00000201550 776 ntBASIC18.52■□□□□ 0.56
Hoxc9P09633 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc9P09633 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc9P09633 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc9P09633 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc9P09633 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc9P09633 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc9P09633 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.51■□□□□ 0.55
Hoxc9P09633 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm11524-201ENSMUST00000119349 807 ntBASIC18.51■□□□□ 0.55
Hoxc9P09633 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm27839-201ENSMUST00000184242 106 ntBASIC18.51■□□□□ 0.55
Hoxc9P09633 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.51■□□□□ 0.55
Hoxc9P09633 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.51■□□□□ 0.55
Hoxc9P09633 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.51■□□□□ 0.55
Hoxc9P09633 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc9P09633 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hoxc9P09633 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Hoxc9P09633 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.5■□□□□ 0.55
Hoxc9P09633 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc9P09633 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.5■□□□□ 0.55
Hoxc9P09633 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms